IL_4U20_216
3D structure
- PDB id
- 4U20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to flopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U20_216 not in the Motif Atlas
- Homologous match to IL_5J7L_036
- Geometric discrepancy: 0.088
- The information below is about IL_5J7L_036
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
4U20|1|CA|G|774
4U20|1|CA|G|775
4U20|1|CA|G|776
4U20|1|CA|A|777
4U20|1|CA|G|778
*
4U20|1|CA|U|804
4U20|1|CA|C|805
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CK
- 30S ribosomal protein S11
- Chain CU
- 30S ribosomal protein S21
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DC
- 50S ribosomal protein L2
Coloring options: