IL_4U24_013

3D structure

PDB id

4U24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGGAC*GCC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U24_013 not in the Motif Atlas

Geometric match to IL_1R3E_002

Geometric discrepancy: 0.1805

The information below is about IL_1R3E_002

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_84476.1

Basepair signature

cWW-cWW

Number of instances in this motif group

13

Unit IDs

4U24|1|AA|G|202
4U24|1|AA|G|203
4U24|1|AA|G|204
4U24|1|AA|A|205
4U24|1|AA|C|206
*
4U24|1|AA|G|213
4U24|1|AA|C|214
4U24|1|AA|C|215

Current chains

Chain AA

16S rRNA

Nearby chains