IL_4U24_086
3D structure
- PDB id
- 4U24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to dalfopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 4U24|1|BA|G|776, 4U24|1|BA|A|788, 4U24|1|BA|A|789
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U24_086 not in the Motif Atlas
- Homologous match to IL_5J7L_265
- Geometric discrepancy: 0.08
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4U24|1|BA|G|775
4U24|1|BA|G|776
4U24|1|BA|G|777
*
4U24|1|BA|C|787
4U24|1|BA|A|788
4U24|1|BA|A|789
4U24|1|BA|U|790
4U24|1|BA|C|791
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain B2
- 50S ribosomal protein L34
- Chain BC
- 50S ribosomal protein L2
- Chain BE
- 50S ribosomal protein L4
- Chain BS
- 50S ribosomal protein L22
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