IL_4U24_266
3D structure
- PDB id
- 4U24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to dalfopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGG*UUACC
- Length
- 9 nucleotides
- Bulged bases
- 4U24|1|DA|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U24_266 not in the Motif Atlas
- Geometric match to IL_7A0S_040
- Geometric discrepancy: 0.3869
- The information below is about IL_7A0S_040
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71194.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
4U24|1|DA|G|879
4U24|1|DA|G|880
4U24|1|DA|G|881
4U24|1|DA|G|882
*
4U24|1|DA|U|894
4U24|1|DA|U|895
4U24|1|DA|A|896
4U24|1|DA|C|897
4U24|1|DA|C|898
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain DM
- 50S ribosomal protein L16
Coloring options: