IL_4U26_117

3D structure

PDB id

4U26 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

4U26|1|BA|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U26_117 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.0827

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4U26|1|BA|C|1437
4U26|1|BA|U|1438
4U26|1|BA|A|1439
4U26|1|BA|U|1440
*
4U26|1|BA|A|1551
4U26|1|BA|A|1552
4U26|1|BA|A|1553
4U26|1|BA|U|1554
4U26|1|BA|G|1555

Current chains

Chain BA

23S rRNA

Nearby chains