IL_4U27_378

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGUC*GUCG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U27_378 not in the Motif Atlas

Geometric match to IL_5EW4_002

Geometric discrepancy: 0.2862

The information below is about IL_5EW4_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

4U27|1|CA|C|1404
4U27|1|CA|G|1405
4U27|1|CA|U|1406
4U27|1|CA|C|1407
*
4U27|1|CA|G|1494
4U27|1|CA|U|1495
4U27|1|CA|C|1496
4U27|1|CA|G|1497

Current chains

Chain CA

16S rRNA

Nearby chains

Chain DA

Large subunit ribosomal RNA; LSU rRNA