IL_4U3M_403

3D structure

PDB id

4U3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Anisomycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUGA*UCUUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U3M_403 not in the Motif Atlas

Geometric match to IL_4V88_422

Geometric discrepancy: 0.2119

The information below is about IL_4V88_422

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

4U3M|1|6|C|709
4U3M|1|6|U|710
4U3M|1|6|U|711
4U3M|1|6|G|712
4U3M|1|6|A|713
*
4U3M|1|6|U|725
4U3M|1|6|C|726
4U3M|1|6|U|727
4U3M|1|6|U|728
4U3M|1|6|G|729

Current chains

Chain 6

18S rRNA

Nearby chains