IL_4U3N_474
3D structure
- PDB id
- 4U3N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAGCC*GUUGUUAC
- Length
- 14 nucleotides
- Bulged bases
- 4U3N|1|1|U|3354, 4U3N|1|1|U|3355
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U3N_474 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.1066
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
4U3N|1|1|G|3345
4U3N|1|1|U|3346
4U3N|1|1|A|3347
4U3N|1|1|G|3348
4U3N|1|1|C|3349
4U3N|1|1|C|3350
*
4U3N|1|1|G|3353
4U3N|1|1|U|3354
4U3N|1|1|U|3355
4U3N|1|1|G|3356
4U3N|1|1|U|3357
4U3N|1|1|U|3358
4U3N|1|1|A|3359
4U3N|1|1|C|3360
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain M9
- 60S ribosomal protein L19-A
- Chain N2
- 60S ribosomal protein L22-A
- Chain S8
- 40S ribosomal protein S8-A
Coloring options: