IL_4U3U_350
3D structure
- PDB id
- 4U3U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Cycloheximide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUUUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 4U3U|1|5|U|3056, 4U3U|1|5|U|3058
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U3U_350 not in the Motif Atlas
- Homologous match to IL_5TBW_118
- Geometric discrepancy: 0.0634
- The information below is about IL_5TBW_118
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- UAA/GAN related
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
4U3U|1|5|U|3054
4U3U|1|5|U|3055
4U3U|1|5|U|3056
4U3U|1|5|U|3057
4U3U|1|5|U|3058
4U3U|1|5|G|3059
*
4U3U|1|5|C|3084
4U3U|1|5|G|3085
4U3U|1|5|A|3086
4U3U|1|5|A|3087
4U3U|1|5|G|3088
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain l3
- 60S ribosomal protein L3
- Chain n4
- 60S ribosomal protein L24-A
- Chain o1
- 60S ribosomal protein L31-A
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