IL_4U3U_411
3D structure
- PDB id
- 4U3U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Cycloheximide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAC*GUUU
- Length
- 7 nucleotides
- Bulged bases
- 4U3U|1|6|U|959
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U3U_411 not in the Motif Atlas
- Geometric match to IL_5UNE_004
- Geometric discrepancy: 0.2587
- The information below is about IL_5UNE_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
4U3U|1|6|G|868
4U3U|1|6|A|869
4U3U|1|6|C|870
*
4U3U|1|6|G|957
4U3U|1|6|U|958
4U3U|1|6|U|959
4U3U|1|6|U|960
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c3
- 40S ribosomal protein S13
- Chain d7
- 40S ribosomal protein S27-A
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