IL_4U4O_491
3D structure
- PDB id
- 4U4O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Geneticin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- UUGA*UUA
- Length
- 7 nucleotides
- Bulged bases
- 4U4O|1|2|U|1657
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U4O_491 not in the Motif Atlas
- Geometric match to IL_2ZI0_001
- Geometric discrepancy: 0.2935
- The information below is about IL_2ZI0_001
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_42997.4
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 21
Unit IDs
4U4O|1|2|U|1656
4U4O|1|2|U|1657
4U4O|1|2|G|1658
4U4O|1|2|A|1659
*
4U4O|1|2|U|1742
4U4O|1|2|U|1743
4U4O|1|2|A|1744
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain D3
- 40S ribosomal protein S23-A
- Chain N3
- 60S ribosomal protein L23-A
- Chain Q1
- 60S ribosomal protein L41-A
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