IL_4U4U_385
3D structure
- PDB id
- 4U4U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Lycorine bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 4U4U|1|6|U|380
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U4U_385 not in the Motif Atlas
- Homologous match to IL_4V88_404
- Geometric discrepancy: 0.0528
- The information below is about IL_4V88_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11347.3
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
4U4U|1|6|G|363
4U4U|1|6|G|364
4U4U|1|6|G|365
*
4U4U|1|6|C|376
4U4U|1|6|G|377
4U4U|1|6|A|378
4U4U|1|6|U|379
4U4U|1|6|U|380
4U4U|1|6|C|381
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain d3
- 40S ribosomal protein S23-A
- Chain s4
- 40S ribosomal protein S4-A
- Chain s9
- 40S ribosomal protein S9-A
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