IL_4U4Y_303
3D structure
- PDB id
- 4U4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Pactamycin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 4U4Y|1|5|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U4Y_303 not in the Motif Atlas
- Homologous match to IL_5TBW_071
- Geometric discrepancy: 0.0892
- The information below is about IL_5TBW_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
4U4Y|1|5|U|1694
4U4Y|1|5|U|1695
4U4Y|1|5|A|1696
4U4Y|1|5|A|1697
4U4Y|1|5|C|1698
*
4U4Y|1|5|G|1747
4U4Y|1|5|G|1748
4U4Y|1|5|A|1749
4U4Y|1|5|A|1750
4U4Y|1|5|G|1751
4U4Y|1|5|A|1752
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain o4
- 60S ribosomal protein L34-A
- Chain o8
- 60S ribosomal protein L38
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