Motif IL_69313.1 Version IL_69313.1 of this group appears in releases 3.80 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5TBW_071 | 5TBW | 0.0000 | 1 | 1 | LSU rRNA | U | 1694 | U | 1695 | A | 1696 | A | 1697 | C | 1698 | * | G | 1747 | G | 1748 | A | 1749 | A | 1750 | A | 1752 | cWW | tWH | tHH | tHS | cWW |
| 2 | IL_8C3A_077 | 8C3A | 0.0896 | 1 | 1 | LSU rRNA | U | 1690 | U | 1691 | A | 1692 | A | 1693 | C | 1694 | * | G | 1743 | G | 1744 | A | 1745 | A | 1746 | A | 1748 | cWW | tWH | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAAC*GGAAGA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAA*GAAG | 2 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Heat map statistics
- Min 0.09 | Avg 0.04 | Max 0.09
Coloring options: