IL_4U50_218
3D structure
- PDB id
- 4U50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Verrucarin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGC*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U50_218 not in the Motif Atlas
- Homologous match to IL_4V88_472
- Geometric discrepancy: 0.0992
- The information below is about IL_4V88_472
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4U50|1|2|G|1672
4U50|1|2|G|1673
4U50|1|2|C|1674
*
4U50|1|2|G|1727
4U50|1|2|A|1728
4U50|1|2|C|1729
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain N4
- 60S ribosomal protein L24-A
- Chain S6
- 40S ribosomal protein S6-A
- Chain S8
- 40S ribosomal protein S8-A
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