IL_4U50_504
3D structure
- PDB id
- 4U50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Verrucarin bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- AAUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- 4U50|1|2|A|1346, 4U50|1|2|U|1347
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U50_504 not in the Motif Atlas
- Homologous match to IL_8CRE_481
- Geometric discrepancy: 0.2633
- The information below is about IL_8CRE_481
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78800.1
- Basepair signature
- cWW-cSH-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4U50|1|2|A|1345
4U50|1|2|A|1346
4U50|1|2|U|1347
4U50|1|2|A|1348
*
4U50|1|2|U|1377
4U50|1|2|U|1378
4U50|1|2|C|1379
4U50|1|2|U|1380
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C6
- 40S ribosomal protein S16-A
- Chain D0
- 40S ribosomal protein S20
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