IL_4U67_036
3D structure
- PDB id
- 4U67 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- CAUAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 4U67|1|X|A|1057
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U67_036 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.292
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
4U67|1|X|C|1054
4U67|1|X|A|1055
4U67|1|X|U|1056
4U67|1|X|A|1057
4U67|1|X|G|1058
4U67|1|X|A|1059
4U67|1|X|C|1060
4U67|1|X|A|1061
4U67|1|X|G|1062
*
4U67|1|X|U|1119
4U67|1|X|C|1120
4U67|1|X|G|1121
4U67|1|X|A|1122
4U67|1|X|G|1123
Current chains
- Chain X
- 23s RNA
Nearby chains
- Chain E
- 50S ribosomal protein L6
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