IL_4U67_051

3D structure

PDB id

4U67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

CUAU*AAACG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U67_051 not in the Motif Atlas

Homologous match to IL_7A0S_053

Geometric discrepancy: 0.109

The information below is about IL_7A0S_053

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

4U67|1|X|C|1451
4U67|1|X|U|1452
4U67|1|X|A|1453
4U67|1|X|U|1454
*
4U67|1|X|A|1567
4U67|1|X|A|1568
4U67|1|X|A|1569
4U67|1|X|C|1570
4U67|1|X|G|1571

Current chains

Chain X

23s RNA

Nearby chains