IL_4UE4_014

3D structure

PDB id

4UE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for targeting and elongation arrest of Bacillus signal recognition particle

Experimental method

ELECTRON MICROSCOPY

Resolution

7 Å

Loop

Sequence

AAU*ACCU

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UE4_014 not in the Motif Atlas

Geometric match to IL_7RQB_031

Geometric discrepancy: 0.3166

The information below is about IL_7RQB_031

Detailed Annotation

Minor groove platform with extra cWW

Broad Annotation

Minor groove platform

Motif group

IL_46796.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

4UE4|1|A|A|140
4UE4|1|A|A|141
4UE4|1|A|U|142
*
4UE4|1|A|A|186
4UE4|1|A|C|187
4UE4|1|A|C|188
4UE4|1|A|U|189

Current chains

Chain A

6S RNA

Nearby chains