IL_4UG0_011

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCGCCGCUCGUGG*CGGCGCGC

Length

21 nucleotides

Bulged bases

4UG0|1|L5|C|185

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|G|177
4UG0|1|L5|C|178
4UG0|1|L5|G|179
4UG0|1|L5|C|180
4UG0|1|L5|C|181
4UG0|1|L5|G|182
4UG0|1|L5|C|183
4UG0|1|L5|U|184
4UG0|1|L5|C|185
4UG0|1|L5|G|186
4UG0|1|L5|U|187
4UG0|1|L5|G|188
4UG0|1|L5|G|189
*
4UG0|1|L5|C|252
4UG0|1|L5|G|253
4UG0|1|L5|G|254
4UG0|1|L5|C|255
4UG0|1|L5|G|256
4UG0|1|L5|C|257
4UG0|1|L5|G|258
4UG0|1|L5|C|259

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LC

60S RIBOSOMAL PROTEIN L4

Chain LL

60S RIBOSOMAL PROTEIN L13

Chain Lh

60S RIBOSOMAL PROTEIN L35

Chain Lj

60S RIBOSOMAL PROTEIN L37