IL_4UG0_063
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUCAUCAGACCCCAGAAAA*UGAAAAUGGAUGGCGCUGGAG
- Length
- 40 nucleotides
- Bulged bases
- 4UG0|1|L5|U|1930, 4UG0|1|L5|C|1935, 4UG0|1|L5|A|2041, 4UG0|1|L5|U|2044, 4UG0|1|L5|G|2055
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|L5|C|1926
4UG0|1|L5|U|1927
4UG0|1|L5|C|1928
4UG0|1|L5|A|1929
4UG0|1|L5|U|1930
4UG0|1|L5|C|1931
4UG0|1|L5|A|1932
4UG0|1|L5|G|1933
4UG0|1|L5|A|1934
4UG0|1|L5|C|1935
4UG0|1|L5|C|1936
4UG0|1|L5|C|1937
4UG0|1|L5|C|1938
4UG0|1|L5|A|1939
4UG0|1|L5|G|1940
4UG0|1|L5|A|1941
4UG0|1|L5|A|1942
4UG0|1|L5|A|1943
4UG0|1|L5|A|1944
*
4UG0|1|L5|U|2038
4UG0|1|L5|G|2039
4UG0|1|L5|A|2040
4UG0|1|L5|A|2041
4UG0|1|L5|A|2042
4UG0|1|L5|A|2043
4UG0|1|L5|U|2044
4UG0|1|L5|G|2045
4UG0|1|L5|G|2046
4UG0|1|L5|A|2047
4UG0|1|L5|U|2048
4UG0|1|L5|G|2049
4UG0|1|L5|G|2050
4UG0|1|L5|C|2051
4UG0|1|L5|G|2052
4UG0|1|L5|C|2053
4UG0|1|L5|U|2054
4UG0|1|L5|G|2055
4UG0|1|L5|G|2056
4UG0|1|L5|A|2057
4UG0|1|L5|G|2058
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LB
- 60S RIBOSOMAL PROTEIN L3
- Chain LH
- 60S RIBOSOMAL PROTEIN L9
- Chain LI
- 60S RIBOSOMAL PROTEIN L10-LIKE
- Chain LM
- 60S RIBOSOMAL PROTEIN L14
- Chain LO
- 60S RIBOSOMAL PROTEIN L13A
- Chain LS
- 60S RIBOSOMAL PROTEIN L18A
- Chain Lf
- 60S RIBOSOMAL PROTEIN L35A
- Chain Lm
- UBIQUITIN-60S RIBOSOMAL PROTEIN L40
Coloring options: