IL_4UG0_070

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAG*CGG

Length

7 nucleotides

Bulged bases

4UG0|1|L5|A|2313

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UG0_070 not in the Motif Atlas

Homologous match to IL_8C3A_064

Geometric discrepancy: 0.5596

The information below is about IL_8C3A_064

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

4UG0|1|L5|C|2311
4UG0|1|L5|U|2312
4UG0|1|L5|A|2313
4UG0|1|L5|G|2314
*
4UG0|1|L5|C|2325
4UG0|1|L5|G|2326
4UG0|1|L5|G|2327

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain Le

60S RIBOSOMAL PROTEIN L32