IL_4UG0_163
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UCCUUU*AUUCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_163 not in the Motif Atlas
- Homologous match to IL_4V88_393
- Geometric discrepancy: 0.1961
- The information below is about IL_4V88_393
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37842.2
- Basepair signature
- cWW-cWW-L-R-cWW-cWW-R-L
- Number of instances in this motif group
- 4
Unit IDs
4UG0|1|S2|U|116
4UG0|1|S2|C|117
4UG0|1|S2|C|118
4UG0|1|S2|U|119
4UG0|1|S2|U|120
4UG0|1|S2|U|121
*
4UG0|1|S2|A|343
4UG0|1|S2|U|344
4UG0|1|S2|U|345
4UG0|1|S2|C|346
4UG0|1|S2|G|347
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SE
- 40S RIBOSOMAL PROTEIN S4, X ISOFORM
- Chain SI
- 40S RIBOSOMAL PROTEIN S8
Coloring options: