IL_4UG0_169
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 4UG0|1|S2|U|368, 4UG0|1|S2|C|369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_169 not in the Motif Atlas
- Geometric match to IL_5Y58_001
- Geometric discrepancy: 0.3313
- The information below is about IL_5Y58_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37738.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4UG0|1|S2|U|366
4UG0|1|S2|U|367
4UG0|1|S2|U|368
4UG0|1|S2|C|369
4UG0|1|S2|G|370
4UG0|1|S2|A|371
*
4UG0|1|S2|U|393
4UG0|1|S2|G|394
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LR
- 60S RIBOSOMAL PROTEIN L19
- Chain SI
- 40S RIBOSOMAL PROTEIN S8
- Chain SL
- 40S RIBOSOMAL PROTEIN S11
Coloring options: