IL_4UG0_174

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAAUA*UAAUUG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|S2|C|527
4UG0|1|S2|A|528
4UG0|1|S2|A|529
4UG0|1|S2|U|530
4UG0|1|S2|A|531
*
4UG0|1|S2|U|553
4UG0|1|S2|A|554
4UG0|1|S2|A|555
4UG0|1|S2|U|556
4UG0|1|S2|U|557
4UG0|1|S2|G|558

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

40S RIBOSOMAL PROTEIN S9

Chain Se

40S RIBOSOMAL PROTEIN S30