IL_4UG0_175

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

4UG0|1|S2|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|S2|A|599
4UG0|1|S2|G|600
4UG0|1|S2|G|601
4UG0|1|S2|G|602
4UG0|1|S2|C|603
4UG0|1|S2|A|604
4UG0|1|S2|A|605
4UG0|1|S2|G|606
4UG0|1|S2|U|607
4UG0|1|S2|C|608
*
4UG0|1|S2|G|635
4UG0|1|S2|C|636
4UG0|1|S2|U|637

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SC

40S RIBOSOMAL PROTEIN S2

Chain SD

40S RIBOSOMAL PROTEIN S3

Chain SJ

40S RIBOSOMAL PROTEIN S9

Chain Se

40S RIBOSOMAL PROTEIN S30