IL_4UG0_187
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUAUU*AAGAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_187 not in the Motif Atlas
- Geometric match to IL_4LFB_065
- Geometric discrepancy: 0.1896
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.2
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
4UG0|1|S2|G|942
4UG0|1|S2|U|943
4UG0|1|S2|A|944
4UG0|1|S2|U|945
4UG0|1|S2|U|946
*
4UG0|1|S2|A|980
4UG0|1|S2|A|981
4UG0|1|S2|G|982
4UG0|1|S2|A|983
4UG0|1|S2|C|984
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain LA
- 60S RIBOSOMAL PROTEIN L8
- Chain SB
- 40S RIBOSOMAL PROTEIN S3A
- Chain SO
- 40S RIBOSOMAL PROTEIN S14
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