IL_4UG0_204
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 4UG0|1|S2|C|1331, 4UG0|1|S2|U|1494, 4UG0|1|S2|G|1497
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_204 not in the Motif Atlas
- Geometric match to IL_4V88_510
- Geometric discrepancy: 0.1842
- The information below is about IL_4V88_510
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62984.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
4UG0|1|S2|U|1329
4UG0|1|S2|G|1330
4UG0|1|S2|C|1331
4UG0|1|S2|A|1332
4UG0|1|S2|U|1333
4UG0|1|S2|G|1334
4UG0|1|S2|G|1335
*
4UG0|1|S2|U|1492
4UG0|1|S2|C|1493
4UG0|1|S2|U|1494
4UG0|1|S2|G|1495
4UG0|1|S2|U|1496
4UG0|1|S2|G|1497
4UG0|1|S2|A|1498
4UG0|1|S2|U|1499
4UG0|1|S2|G|1500
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SD
- 40S RIBOSOMAL PROTEIN S3
- Chain SK
- 40S RIBOSOMAL PROTEIN S10
- Chain SU
- 40S RIBOSOMAL PROTEIN S20
- Chain Sd
- 40S RIBOSOMAL PROTEIN S29
Coloring options: