IL_4UG0_210
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGGAUCG*CAUGAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_210 not in the Motif Atlas
- Homologous match to IL_8C3A_469
- Geometric discrepancy: 0.2299
- The information below is about IL_8C3A_469
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10092.1
- Basepair signature
- cWW-tSH-tSH-L-R-cWW-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
4UG0|1|S2|G|1604
4UG0|1|S2|G|1605
4UG0|1|S2|G|1606
4UG0|1|S2|A|1607
4UG0|1|S2|U|1608
4UG0|1|S2|C|1609
4UG0|1|S2|G|1610
*
4UG0|1|S2|C|1629
4UG0|1|S2|A|1630
4UG0|1|S2|U|1631
4UG0|1|S2|G|1632
4UG0|1|S2|A|1633
4UG0|1|S2|A|1634
4UG0|1|S2|C|1635
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SS
- 40S RIBOSOMAL PROTEIN S18
- Chain ST
- 40S RIBOSOMAL PROTEIN S19
Coloring options: