IL_4UG0_224

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GACCCGCUCCCC*GGCCCGGGUC

Length

22 nucleotides

Bulged bases

4UG0|1|L5|C|172, 4UG0|1|L5|C|265, 4UG0|1|L5|C|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|G|164
4UG0|1|L5|A|165
4UG0|1|L5|C|166
4UG0|1|L5|C|167
4UG0|1|L5|C|168
4UG0|1|L5|G|169
4UG0|1|L5|C|170
4UG0|1|L5|U|171
4UG0|1|L5|C|172
4UG0|1|L5|C|173
4UG0|1|L5|C|174
4UG0|1|L5|C|175
*
4UG0|1|L5|G|262
4UG0|1|L5|G|263
4UG0|1|L5|C|264
4UG0|1|L5|C|265
4UG0|1|L5|C|266
4UG0|1|L5|G|267
4UG0|1|L5|G|268
4UG0|1|L5|G|269
4UG0|1|L5|U|270
4UG0|1|L5|C|271

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LL

60S RIBOSOMAL PROTEIN L13

Chain Lh

60S RIBOSOMAL PROTEIN L35

Chain Li

60S RIBOSOMAL PROTEIN L36