IL_4UG0_229

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCUGGGAAGGCCCGGCG*CCCCGGCAGCAGCACUCGC

Length

36 nucleotides

Bulged bases

4UG0|1|L5|U|728, 4UG0|1|L5|G|729, 4UG0|1|L5|A|935, 4UG0|1|L5|C|936, 4UG0|1|L5|U|937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|G|726
4UG0|1|L5|C|727
4UG0|1|L5|U|728
4UG0|1|L5|G|729
4UG0|1|L5|G|730
4UG0|1|L5|G|731
4UG0|1|L5|A|732
4UG0|1|L5|A|733
4UG0|1|L5|G|734
4UG0|1|L5|G|735
4UG0|1|L5|C|736
4UG0|1|L5|C|737
4UG0|1|L5|C|738
4UG0|1|L5|G|739
4UG0|1|L5|G|740
4UG0|1|L5|C|741
4UG0|1|L5|G|742
*
4UG0|1|L5|C|922
4UG0|1|L5|C|923
4UG0|1|L5|C|924
4UG0|1|L5|C|925
4UG0|1|L5|G|926
4UG0|1|L5|G|927
4UG0|1|L5|C|928
4UG0|1|L5|A|929
4UG0|1|L5|G|930
4UG0|1|L5|C|931
4UG0|1|L5|A|932
4UG0|1|L5|G|933
4UG0|1|L5|C|934
4UG0|1|L5|A|935
4UG0|1|L5|C|936
4UG0|1|L5|U|937
4UG0|1|L5|C|938
4UG0|1|L5|G|939
4UG0|1|L5|C|940

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S RIBOSOMAL PROTEIN L4

Chain LF

60S RIBOSOMAL PROTEIN L7

Chain LM

60S RIBOSOMAL PROTEIN L14

Chain LS

60S RIBOSOMAL PROTEIN L18A