IL_4UG0_238
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGCCG*CGG
- Length
- 8 nucleotides
- Bulged bases
- 4UG0|1|L5|G|1919, 4UG0|1|L5|C|1921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_238 not in the Motif Atlas
- Geometric match to IL_6M6R_001
- Geometric discrepancy: 0.2431
- The information below is about IL_6M6R_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
4UG0|1|L5|U|1918
4UG0|1|L5|G|1919
4UG0|1|L5|C|1920
4UG0|1|L5|C|1921
4UG0|1|L5|G|1922
*
4UG0|1|L5|C|2062
4UG0|1|L5|G|2063
4UG0|1|L5|G|2064
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LF
- 60S RIBOSOMAL PROTEIN L7
- Chain LM
- 60S RIBOSOMAL PROTEIN L14
- Chain LO
- 60S RIBOSOMAL PROTEIN L13A
- Chain LS
- 60S RIBOSOMAL PROTEIN L18A
- Chain Lf
- 60S RIBOSOMAL PROTEIN L35A
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