IL_4UG0_239

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAUAUAGACAGCA*UGCCGAAUCA

Length

24 nucleotides

Bulged bases

4UG0|1|L5|A|1958, 4UG0|1|L5|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|U|1954
4UG0|1|L5|G|1955
4UG0|1|L5|A|1956
4UG0|1|L5|U|1957
4UG0|1|L5|A|1958
4UG0|1|L5|U|1959
4UG0|1|L5|A|1960
4UG0|1|L5|G|1961
4UG0|1|L5|A|1962
4UG0|1|L5|C|1963
4UG0|1|L5|A|1964
4UG0|1|L5|G|1965
4UG0|1|L5|C|1966
4UG0|1|L5|A|1967
*
4UG0|1|L5|U|2020
4UG0|1|L5|G|2021
4UG0|1|L5|C|2022
4UG0|1|L5|C|2023
4UG0|1|L5|G|2024
4UG0|1|L5|A|2025
4UG0|1|L5|A|2026
4UG0|1|L5|U|2027
4UG0|1|L5|C|2028
4UG0|1|L5|A|2029

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LH

60S RIBOSOMAL PROTEIN L9

Chain LI

60S RIBOSOMAL PROTEIN L10-LIKE

Chain LS

60S RIBOSOMAL PROTEIN L18A

Chain Lm

UBIQUITIN-60S RIBOSOMAL PROTEIN L40