IL_4UG0_266
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCUCAGCGUGUGCCUACCC*GGUAACCCGUUGAACCC
- Length
- 36 nucleotides
- Bulged bases
- 4UG0|1|S2|U|1543, 4UG0|1|S2|C|1544, 4UG0|1|S2|G|1552, 4UG0|1|S2|C|1553, 4UG0|1|S2|C|1554, 4UG0|1|S2|U|1555, 4UG0|1|S2|A|1580, 4UG0|1|S2|C|1581, 4UG0|1|S2|U|1585, 4UG0|1|S2|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|S2|G|1541
4UG0|1|S2|C|1542
4UG0|1|S2|U|1543
4UG0|1|S2|C|1544
4UG0|1|S2|A|1545
4UG0|1|S2|G|1546
4UG0|1|S2|C|1547
4UG0|1|S2|G|1548
4UG0|1|S2|U|1549
4UG0|1|S2|G|1550
4UG0|1|S2|U|1551
4UG0|1|S2|G|1552
4UG0|1|S2|C|1553
4UG0|1|S2|C|1554
4UG0|1|S2|U|1555
4UG0|1|S2|A|1556
4UG0|1|S2|C|1557
4UG0|1|S2|C|1558
4UG0|1|S2|C|1559
*
4UG0|1|S2|G|1576
4UG0|1|S2|G|1577
4UG0|1|S2|U|1578
4UG0|1|S2|A|1579
4UG0|1|S2|A|1580
4UG0|1|S2|C|1581
4UG0|1|S2|C|1582
4UG0|1|S2|C|1583
4UG0|1|S2|G|1584
4UG0|1|S2|U|1585
4UG0|1|S2|U|1586
4UG0|1|S2|G|1587
4UG0|1|S2|A|1588
4UG0|1|S2|A|1589
4UG0|1|S2|C|1590
4UG0|1|S2|C|1591
4UG0|1|S2|C|1592
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SD
- 40S RIBOSOMAL PROTEIN S3
- Chain SF
- 40S RIBOSOMAL PROTEIN S5
- Chain SK
- 40S RIBOSOMAL PROTEIN S10
- Chain SQ
- 40S RIBOSOMAL PROTEIN S16
- Chain ST
- 40S RIBOSOMAL PROTEIN S19
- Chain SU
- 40S RIBOSOMAL PROTEIN S20
- Chain SZ
- 40S RIBOSOMAL PROTEIN S25
- Chain Sd
- 40S RIBOSOMAL PROTEIN S29
Coloring options: