IL_4UG0_275

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCG*CC

Length

5 nucleotides

Bulged bases

4UG0|1|L5|C|4900

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UG0_275 not in the Motif Atlas

Geometric match to IL_3W3S_001

Geometric discrepancy: 0.3763

The information below is about IL_3W3S_001

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

60

Unit IDs

4UG0|1|L5|G|4899
4UG0|1|L5|C|4900
4UG0|1|L5|G|4901
*
4UG0|1|L5|C|4920
4UG0|1|L5|C|4921

Current chains

Chain L5

28S ribosomal RNA

Nearby chains