IL_4UJC_152
3D structure
- PDB id
- 4UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- GU*AUC
- Length
- 5 nucleotides
- Bulged bases
- 4UJC|1|A3|U|89
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJC_152 not in the Motif Atlas
- Homologous match to IL_5TBW_146
- Geometric discrepancy: 0.1476
- The information below is about IL_5TBW_146
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
4UJC|1|A3|G|68
4UJC|1|A3|U|69
*
4UJC|1|A3|A|88
4UJC|1|A3|U|89
4UJC|1|A3|C|90
Current chains
- Chain A3
- 5.8S RIBOSOMAL RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain BY
- 60S RIBOSOMAL PROTEIN L26
- Chain Bh
- 60S RIBOSOMAL PROTEIN UL29
- Chain Bj
- 60S RIBOSOMAL PROTEIN L37
- Chain Bl
- 60S RIBOSOMAL PROTEIN L39
Coloring options: