IL_4UJC_174

3D structure

PDB id

4UJC (explore in PDB, NAKB, or RNA 3D Hub)

Description

mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

GUUAU*ACGUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJC|1|C1|G|108
4UJC|1|C1|U|109
4UJC|1|C1|U|110
4UJC|1|C1|A|111
4UJC|1|C1|U|112
*
4UJC|1|C1|A|349
4UJC|1|C1|C|350
4UJC|1|C1|G|351
4UJC|1|C1|U|352
4UJC|1|C1|C|353

Current chains

Chain C1

18S RIBOSOMAL RNA

Nearby chains

Chain CE

40S RIBOSOMAL PROTEIN ES4

Chain CI

40S RIBOSOMAL PROTEIN ES8

Chain CL

40S RIBOSOMAL PROTEIN US17