IL_4UJC_258
3D structure
- PDB id
- 4UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- GGGACGGCUGG*CUCGCCGAAUCCC
- Length
- 24 nucleotides
- Bulged bases
- 4UJC|1|A2|A|927
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJC|1|A2|G|708
4UJC|1|A2|G|709
4UJC|1|A2|G|710
4UJC|1|A2|A|711
4UJC|1|A2|C|712
4UJC|1|A2|G|713
4UJC|1|A2|G|714
4UJC|1|A2|C|715
4UJC|1|A2|U|716
4UJC|1|A2|G|717
4UJC|1|A2|G|718
*
4UJC|1|A2|C|920
4UJC|1|A2|U|921
4UJC|1|A2|C|922
4UJC|1|A2|G|923
4UJC|1|A2|C|924
4UJC|1|A2|C|925
4UJC|1|A2|G|926
4UJC|1|A2|A|927
4UJC|1|A2|A|928
4UJC|1|A2|U|929
4UJC|1|A2|C|930
4UJC|1|A2|C|931
4UJC|1|A2|C|932
Current chains
- Chain A2
- 28S RIBOSOMAL RNA
Nearby chains
- Chain BC
- 60S RIBOSOMAL PROTEIN L4
- Chain BE
- 60S RIBOSOMAL PROTEIN L6
- Chain BF
- 60S RIBOSOMAL PROTEIN L7
- Chain BM
- 60S RIBOSOMAL PROTEIN L14
- Chain BS
- 60S RIBOSOMAL PROTEIN L18A
- Chain Bf
- 60S RIBOSOMAL PROTEIN L35A
Coloring options: