IL_4UJC_259

3D structure

PDB id

4UJC (explore in PDB, NAKB, or RNA 3D Hub)

Description

mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

GGGAAGGU*ACAGCCC

Length

15 nucleotides

Bulged bases

4UJC|1|A2|A|734

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJC|1|A2|G|731
4UJC|1|A2|G|732
4UJC|1|A2|G|733
4UJC|1|A2|A|734
4UJC|1|A2|A|735
4UJC|1|A2|G|736
4UJC|1|A2|G|737
4UJC|1|A2|U|738
*
4UJC|1|A2|A|899
4UJC|1|A2|C|900
4UJC|1|A2|A|901
4UJC|1|A2|G|902
4UJC|1|A2|C|903
4UJC|1|A2|C|904
4UJC|1|A2|C|905

Current chains

Chain A2

28S RIBOSOMAL RNA

Nearby chains

Chain BM

60S RIBOSOMAL PROTEIN L14

Chain BS

60S RIBOSOMAL PROTEIN L18A