IL_4UJC_328
3D structure
- PDB id
- 4UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- CCUUGAAG*UGGAGG
- Length
- 14 nucleotides
- Bulged bases
- 4UJC|1|A2|U|2281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJC|1|A2|C|2278
4UJC|1|A2|C|2279
4UJC|1|A2|U|2280
4UJC|1|A2|U|2281
4UJC|1|A2|G|2282
4UJC|1|A2|A|2283
4UJC|1|A2|A|2284
4UJC|1|A2|G|2285
*
4UJC|1|A2|U|2305
4UJC|1|A2|G|2306
4UJC|1|A2|G|2307
4UJC|1|A2|A|2308
4UJC|1|A2|G|2309
4UJC|1|A2|G|2310
Current chains
- Chain A2
- 28S RIBOSOMAL RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- 60S RIBOSOMAL PROTEIN L4
- Chain BY
- 60S RIBOSOMAL PROTEIN L26
- Chain Be
- 60S RIBOSOMAL PROTEIN L32
Coloring options: