IL_4UJC_332

3D structure

PDB id

4UJC (explore in PDB, NAKB, or RNA 3D Hub)

Description

mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

CCGC*GACCG

Length

9 nucleotides

Bulged bases

4UJC|1|A2|G|4735

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJC|1|A2|C|4733
4UJC|1|A2|C|4734
4UJC|1|A2|G|4735
4UJC|1|A2|C|4736
*
4UJC|1|A2|G|4811
4UJC|1|A2|A|4812
4UJC|1|A2|C|4813
4UJC|1|A2|C|4814
4UJC|1|A2|G|4815

Current chains

Chain A2

28S RIBOSOMAL RNA

Nearby chains

Chain BH

60S RIBOSOMAL PROTEIN L9

Chain BM

60S RIBOSOMAL PROTEIN L14

Chain BO

60S RIBOSOMAL PROTEIN L13A