IL_4UJD_299
3D structure
- PDB id
- 4UJD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.9 Å
Loop
- Sequence
- UCUCAAA*UGACGAAA
- Length
- 15 nucleotides
- Bulged bases
- 4UJD|1|C1|A|516
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJD|1|C1|U|34
4UJD|1|C1|C|35
4UJD|1|C1|U|36
4UJD|1|C1|C|37
4UJD|1|C1|A|38
4UJD|1|C1|A|39
4UJD|1|C1|A|40
*
4UJD|1|C1|U|514
4UJD|1|C1|G|515
4UJD|1|C1|A|516
4UJD|1|C1|C|517
4UJD|1|C1|G|518
4UJD|1|C1|A|519
4UJD|1|C1|A|520
4UJD|1|C1|A|521
Current chains
- Chain C1
- 18S Ribosomal RNA
Nearby chains
- Chain CE
- 40S RIBOSOMAL PROTEIN ES4
- Chain CJ
- 40S RIBOSOMAL PROTEIN US4
- Chain CY
- 40S RIBOSOMAL PROTEIN ES24
Coloring options: