IL_4UJD_324
3D structure
- PDB id
- 4UJD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.9 Å
Loop
- Sequence
- GGGACGGCUG*UCGCCGAAUCCC
- Length
- 22 nucleotides
- Bulged bases
- 4UJD|1|A2|A|927
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJD|1|A2|G|708
4UJD|1|A2|G|709
4UJD|1|A2|G|710
4UJD|1|A2|A|711
4UJD|1|A2|C|712
4UJD|1|A2|G|713
4UJD|1|A2|G|714
4UJD|1|A2|C|715
4UJD|1|A2|U|716
4UJD|1|A2|G|717
*
4UJD|1|A2|U|921
4UJD|1|A2|C|922
4UJD|1|A2|G|923
4UJD|1|A2|C|924
4UJD|1|A2|C|925
4UJD|1|A2|G|926
4UJD|1|A2|A|927
4UJD|1|A2|A|928
4UJD|1|A2|U|929
4UJD|1|A2|C|930
4UJD|1|A2|C|931
4UJD|1|A2|C|932
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain AC
- 60S RIBOSOMAL PROTEIN L4
- Chain AE
- 60S RIBOSOMAL PROTEIN L6
- Chain AF
- 60S RIBOSOMAL PROTEIN L7
- Chain AM
- 60S RIBOSOMAL PROTEIN L14
- Chain AS
- 60S RIBOSOMAL PROTEIN L18A
- Chain Af
- 60S RIBOSOMAL PROTEIN L35A
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