IL_4UJE_008
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GAC*GC
- Length
- 5 nucleotides
- Bulged bases
- 4UJE|1|A2|A|340
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_008 not in the Motif Atlas
- Homologous match to IL_5TBW_013
- Geometric discrepancy: 0.1353
- The information below is about IL_5TBW_013
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
4UJE|1|A2|G|339
4UJE|1|A2|A|340
4UJE|1|A2|C|341
*
4UJE|1|A3|G|25
4UJE|1|A3|C|26
Current chains
- Chain A2
- 28S Ribosomal RNA
- Chain A3
- 5.8S Ribosomal RNA
Nearby chains
- Chain CC
- 60S RIBOSOMAL PROTEIN L4
- Chain CY
- 60S RIBOSOMAL PROTEIN L26
- Chain Cj
- 60S RIBOSOMAL PROTEIN L37
Coloring options: