IL_4UJE_023

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GGAAGGCC*GCAGCAGCAC

Length

18 nucleotides

Bulged bases

4UJE|1|A2|C|912

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|G|718
4UJE|1|A2|G|719
4UJE|1|A2|A|720
4UJE|1|A2|A|721
4UJE|1|A2|G|722
4UJE|1|A2|G|723
4UJE|1|A2|C|724
4UJE|1|A2|C|725
*
4UJE|1|A2|G|911
4UJE|1|A2|C|912
4UJE|1|A2|A|913
4UJE|1|A2|G|914
4UJE|1|A2|C|915
4UJE|1|A2|A|916
4UJE|1|A2|G|917
4UJE|1|A2|C|918
4UJE|1|A2|A|919
4UJE|1|A2|C|920

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CC

60S RIBOSOMAL PROTEIN L4

Chain CF

60S RIBOSOMAL PROTEIN L7

Chain CM

60S RIBOSOMAL PROTEIN L14

Chain CS

60S RIBOSOMAL PROTEIN L18A