IL_4UJE_036

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

4UJE|1|A2|C|1358, 4UJE|1|A2|C|1359

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|C|1337
4UJE|1|A2|G|1338
4UJE|1|A2|G|1339
4UJE|1|A2|G|1340
4UJE|1|A2|G|1341
*
4UJE|1|A2|C|1356
4UJE|1|A2|G|1357
4UJE|1|A2|C|1358
4UJE|1|A2|C|1359
4UJE|1|A2|G|1360
4UJE|1|A2|U|1361
4UJE|1|A2|G|1362

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CC

60S RIBOSOMAL PROTEIN L4

Chain CL

60S RIBOSOMAL PROTEIN L13

Chain CN

60S RIBOSOMAL PROTEIN L15

Chain Ca

60S RIBOSOMAL PROTEIN L27A