IL_4UJE_049
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UCCA*UGCGA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_049 not in the Motif Atlas
- Geometric match to IL_7EU9_001
- Geometric discrepancy: 0.3596
- The information below is about IL_7EU9_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
4UJE|1|A2|U|1672
4UJE|1|A2|C|1673
4UJE|1|A2|C|1701
4UJE|1|A2|A|1702
*
4UJE|1|A2|U|1817
4UJE|1|A2|G|1818
4UJE|1|A2|C|1819
4UJE|1|A2|G|1820
4UJE|1|A2|A|1821
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain CF
- 60S RIBOSOMAL PROTEIN L7
- Chain CQ
- 60S RIBOSOMAL PROTEIN L18
- Chain CT
- 60S RIBOSOMAL PROTEIN L21
- Chain Cb
- 60S RIBOSOMAL PROTEIN L29
Coloring options: