IL_4UJE_065
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 4UJE|1|A2|U|1925
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_065 not in the Motif Atlas
- Homologous match to IL_8C3A_056
- Geometric discrepancy: 0.2657
- The information below is about IL_8C3A_056
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
4UJE|1|A2|G|1924
4UJE|1|A2|U|1925
4UJE|1|A2|G|1926
*
4UJE|1|A2|C|2013
4UJE|1|A2|C|2014
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain A4
- 5S ribosomal RNA; 5S rRNA
- Chain CH
- 60S RIBOSOMAL PROTEIN L9
- Chain CS
- 60S RIBOSOMAL PROTEIN L18A
- Chain Cm
- UBIQUITIN-60S RIBOSOMAL PROTEIN L40
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