IL_4UJE_066
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GCCG*CCGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_066 not in the Motif Atlas
- Geometric match to IL_1MFQ_004
- Geometric discrepancy: 0.3353
- The information below is about IL_1MFQ_004
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
4UJE|1|A2|G|2060
4UJE|1|A2|C|2061
4UJE|1|A2|C|2062
4UJE|1|A2|G|2063
*
4UJE|1|A2|C|2247
4UJE|1|A2|C|2248
4UJE|1|A2|G|2249
4UJE|1|A2|C|2250
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain CC
- 60S RIBOSOMAL PROTEIN L4
- Chain CF
- 60S RIBOSOMAL PROTEIN L7
- Chain CQ
- 60S RIBOSOMAL PROTEIN L18
- Chain Ce
- 60S RIBOSOMAL PROTEIN L32
- Chain Ct
- 60S RIBOSOMAL PROTEIN L28
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