IL_4UJE_069

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GCCUUGAAGC*GUGGAGGC

Length

18 nucleotides

Bulged bases

4UJE|1|A2|U|2281

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|G|2277
4UJE|1|A2|C|2278
4UJE|1|A2|C|2279
4UJE|1|A2|U|2280
4UJE|1|A2|U|2281
4UJE|1|A2|G|2282
4UJE|1|A2|A|2283
4UJE|1|A2|A|2284
4UJE|1|A2|G|2285
4UJE|1|A2|C|2286
*
4UJE|1|A2|G|2304
4UJE|1|A2|U|2305
4UJE|1|A2|G|2306
4UJE|1|A2|G|2307
4UJE|1|A2|A|2308
4UJE|1|A2|G|2309
4UJE|1|A2|G|2310
4UJE|1|A2|C|2311

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain A3

5.8S ribosomal RNA; 5.8S rRNA

Chain CC

60S RIBOSOMAL PROTEIN L4

Chain CY

60S RIBOSOMAL PROTEIN L26

Chain Ce

60S RIBOSOMAL PROTEIN L32

Chain Ct

60S RIBOSOMAL PROTEIN L28